The detailed information of tRNA gene sequence


Sequence ID>W1610001658
Genome IDADCE01000004
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome acidiphilum ARMAN-4 [ADCE]
Start position on genome 5871
End posion on genome 5953
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaagtgaaaa
tRNA gene sequence 
GCTGGGTTGGCTGAGCGGTTAAAGCGCCGGTCTCGAGAACCGGTTTCCGAAAGGATGCGT
AGGTTCGAATCCTGCACCCAGCGttt
Downstream region at tRNA end position 
ttacagtaat
Secondary structure (Cloverleaf model)
>W1610001658	Ser	CGA
                   a      Gttt ttacagtaat
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      C G A        G      | + | | |     G
    G       G T C G       G T A G G     C
    G         | | |                 T T
    T       A A G C
      T A          G     TTTCCGAAAGGATGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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