The detailed information of tRNA gene sequence


Sequence ID>W1610001678
Genome IDADCE01000039
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome acidiphilum ARMAN-4 [ADCE]
Start position on genome 5261
End posion on genome 5334
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
acgcttaata
tRNA gene sequence 
GCCCTCGTAGTTTAGCTTGGACAGAATACCGGTTTCCTAAACCGGGCACCCAGGTTCAAA
TCCTGGCGAGGGCAttt
Downstream region at tRNA end position 
atacattttt
Secondary structure (Cloverleaf model)
>W1610001678	Arg	CCT
                   a      Attt atacattttt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G T C C     A
    T C G A        A      | | | | |     A
  T         T T T G       C C A G G     C
  G         + | | +                 T T
  G         G A A T
    A C A          A     GCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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