The detailed information of tRNA gene sequence


Sequence ID>W1610002118
Genome IDAEDA01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 52217
End posion on genome 52142
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tattagtaat
tRNA gene sequence 
GCTCCAGTGGTGTAGTCCGGCCAATCATGCGGGCCTTTCGAGCCCGCGACTCGGGTTCAA
ATCCCGGCTGGAGCACtt
Downstream region at tRNA end position 
taattctcta
Secondary structure (Cloverleaf model)
>W1610002118	Glu	TTC
                   t      ACtt taattctcta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      + | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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