The detailed information of tRNA gene sequence


Sequence ID>W1610002125
Genome IDAEDA01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 116017
End posion on genome 115943
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttgttataaa
tRNA gene sequence 
GGGCCCGTAGTTTAGCCTGGATAGAATACGGGGCTTCGGACCCCGGGATCGAGGGTTCAA
ATCCCTCCGGGCTCGtat
Downstream region at tRNA end position 
ttttatatat
Secondary structure (Cloverleaf model)
>W1610002125	Arg	TCG
                   a      Gtat ttttatatat
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C C G A        A      | | | | |     A
  T         T T T G       G A G G G     C
  G         + | | +                 T T
  G         G A A T
    A T A          A     GGATC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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