The detailed information of tRNA gene sequence


Sequence ID>W1610002129
Genome IDAEDA01000005
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 35396
End posion on genome 35319
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgtttaata
tRNA gene sequence 
GGGCCTGTGGGGTAGCCTGGTCCATCCTTTGGGATTTGGGATCCTGAGACCCCAGTTCGA
ATCTGGGCAGGCCCACCA
Downstream region at tRNA end position 
cttattaatt
Secondary structure (Cloverleaf model)
>W1610002129	Pro	TGG
                   a      ACCA cttattaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G G T C     A
    C C G A        G      | | | | |     G
  T         T G G G       C C C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        T     AGAC
                    T + G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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