The detailed information of tRNA gene sequence


Sequence ID>W1610002141
Genome IDAEDA01000008
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 51229
End posion on genome 51154
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttagttttgt
tRNA gene sequence 
AGGGCAGTGGCTCAGCCTGGTTAGAGTGCTCGGCTGATAACCGAGTGGTCCGGGGTTCGA
ATCCCCGCTGCCCTACtt
Downstream region at tRNA end position 
tttattttgg
Secondary structure (Cloverleaf model)
>W1610002141	Ile	GAT
                   t      ACtt tttattttgg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G C C C C     A
    C C G A        G      | | | | |     G
  T         C T C G       C G G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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