The detailed information of tRNA gene sequence


Sequence ID>W1610002144
Genome IDAEDA01000010
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 27414
End posion on genome 27490
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaagcacatt
tRNA gene sequence 
GGGCCCATGGTCTAGTTGGCTATGACATCGCCCTTACAAGGCGAGGGTCGCCGGTTCGAA
TCCGGCTGGGCCCACTA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>W1610002144	Val	TAC
                   t      ACTA tttttatttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    T       T C T G       G C C G G     C
    G         | | |                 T T
    G       T G A C
      C T A        A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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