The detailed information of tRNA gene sequence


Sequence ID>W1610002148
Genome IDAEDA01000026
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermococcus okinawensis IH1 [AEDA]
Start position on genome 6137
End posion on genome 6212
Amino Acid Pseudo
Anticodon GCG
Upstream region at tRNA start position 
aatagaataT
tRNA gene sequence 
GCCCCTGTGGGTTAGTCAGGACATGCTTGCGAACTGCGGATTCGCCGACCCGGGTTCAAA
TCCCGGCAGGGGCGTta
Downstream region at tRNA end position 
tatattttta
Secondary structure (Cloverleaf model)
>W1610002148	Pseudo	GCG
                   T      GTta tatattttta
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  A         T T G G       C C G G G     C
  G           + | +                 T T
  G         T G C T
    A C A          T     CGAC
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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