The detailed information of tRNA gene sequence


Sequence ID>W1610002154
Genome IDAEGP01000033
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia SFB1 [AEGP]
Start position on genome 47603
End posion on genome 47696
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taattttgtT
tRNA gene sequence 
GGACCGGTTGTCTAGTGGTTAGGATGACGCACTCACACTGCGTATGGAGAAATCCCGCAA
AGGTCGAGGGTTCAAATCCCTCCCGGTCCACCC
Downstream region at tRNA end position 
ctatagtgtc
Secondary structure (Cloverleaf model)
>W1610002154	Val	CAC
                   T      ACCC ctatagtgtc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        T      | | | | |     A
    G       T C T G       G A G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     ATGGAGAAATCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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