The detailed information of tRNA gene sequence


Sequence ID>W1610002185
Genome IDAEIX01000214
Search identical group
Phylum/ClassUnclassified
Specieshypersaline lake metagenome sp. J07AB56 [AEIX]
Start position on genome 815
End posion on genome 740
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atccattgtt
tRNA gene sequence 
AGCGGGGTGGAGCAGCCAGGAGTGCTCGTCGGGCTCATAACCCGGAGGTCCGTGGTTCAA
ATCCACGCTCCGCTACtc
Downstream region at tRNA end position 
tcctaagcta
Secondary structure (Cloverleaf model)
>W1610002185	Met	CAT
                   t      ACtc tcctaagcta
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     G C A C C     A
    C C G A        G      | | | | |     A
  A         C G A G       C G T G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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