The detailed information of tRNA gene sequence


Sequence ID>W1610002205
Genome IDAEIX01000259
Search identical group
Phylum/ClassUnclassified
Specieshypersaline lake metagenome sp. J07AB56 [AEIX]
Start position on genome 11789
End posion on genome 11881
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtttgtgT
tRNA gene sequence 
GCCGGGATGACTGAGTCTGGCCTAAGGTGCCAGCCTGGAAAGCTGGTGGGGCATTGCGCC
CCTCCTGGGTTCAAATCCCAGTCCCGGCGTCA
Downstream region at tRNA end position 
gtgaaccccc
Secondary structure (Cloverleaf model)
>W1610002205	Ser	GGA
                   T      GTCA gtgaaccccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     A
  T         G T C A       C T G G G     C
  G           + | |                 T T
  G         A G G T
    C C T A        G     TGGGGCATTGCGCCCCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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