The detailed information of tRNA gene sequence


Sequence ID>W1610002216
Genome IDAEIY01000050
Search identical group
Phylum/ClassUnclassified
Specieshypersaline lake metagenome sp. J07AB43 [AEIY]
Start position on genome 1224
End posion on genome 1151
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acattaagta
tRNA gene sequence 
GGGCCCTTAGTTCAGCCTGGCAGAACGTCCCCCTTGCAAGGGGAAGGCCCAGGGTTCAAA
TCCCTGAGGGTCCAtac
Downstream region at tRNA end position 
atgtccgtgt
Secondary structure (Cloverleaf model)
>W1610002216	Ala	TGC
                   a      Atac atgtccgtgt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    C       C T T G       C A G G G     C
    T       | | | |                 T T
    G       G A A C
      G C A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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