The detailed information of tRNA gene sequence


Sequence ID>W1610002230
Genome IDAEIY01000174
Search identical group
Phylum/ClassUnclassified
Specieshypersaline lake metagenome sp. J07AB43 [AEIY]
Start position on genome 1233
End posion on genome 1323
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaggctgT
tRNA gene sequence 
GCCGGGGTGGCAGAGTCTGGTTAATTGCGCCGGTCTTGAGAACCGGTGACCCATATGCGG
TCTCCTGGGTTCAAATCCCAGCCCCGGCGAaa
Downstream region at tRNA end position 
caccaaacaa
Secondary structure (Cloverleaf model)
>W1610002230	Ser	TGA
                   T      GAaa caccaaacaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     A
  T         G A C G       C T G G G     C
  G         + | | |                 T T
  G         T T G C
    T T A A        G     TGACCCATATGCGGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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