The detailed information of tRNA gene sequence


Sequence ID>W1610002538
Genome IDAELR01000016
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter smithii TS147A [AELR]
Start position on genome 43578
End posion on genome 43662
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accaacaaaT
tRNA gene sequence 
GTTGAGGTAGCCTAGTCTGGTAGGGCGTTAGACTGCTAATCTAATGATGTAATATCTCAT
GGGTTCAAATCCCATCCTCAACGTtt
Downstream region at tRNA end position 
tttaaaaaaa
Secondary structure (Cloverleaf model)
>W1610002538	Ser	GCT
                   T      GTtt tttaaaaaaa
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        A      | | | | |     A
    C       T C C G       A T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGATGTAATATCTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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