The detailed information of tRNA gene sequence


Sequence ID>W1610003092
Genome IDAEXL02000083
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus salaria salaria BD31 [AEXL]
Start position on genome 4087
End posion on genome 4010
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tttttgacaa
tRNA gene sequence 
GCTCCTATAGTGTAGTCCGGTTAAGCATTTTGGCTTCTCAAGCCAAAGACTCGGGTTCAA
ATCCCGATGGGAGCACCA
Downstream region at tRNA end position 
tcattctgtg
Secondary structure (Cloverleaf model)
>W1610003092	Glu	CTC
                   a      ACCA tcattctgtg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     A G C C C     A
    C T G A        A      | | | | |     A
  C         T G T G       T C G G G     C
  G         + | | +                 T T
  G         G C A T
    T T A A        T     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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