The detailed information of tRNA gene sequence


Sequence ID>W1610003094
Genome IDAEXL02000089
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus salaria salaria BD31 [AEXL]
Start position on genome 3748
End posion on genome 3824
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atggcatact
tRNA gene sequence 
GGGATCGTGGTCTAGCTTGGTATGATTCTGCGTTTGGGACGCAGAGGTCGAGTGTTCAAA
TCTCTCCGATCCCACCA
Downstream region at tRNA end position 
tttcattatc
Secondary structure (Cloverleaf model)
>W1610003094	Pro	TGG
                   t      ACCA tttcattatc
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | |   |     A
    T       T C T G       G A G T G     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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