The detailed information of tRNA gene sequence


Sequence ID>W1610003096
Genome IDAEXL02000091
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus salaria salaria BD31 [AEXL]
Start position on genome 4222
End posion on genome 4146
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgagtgcatt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGTACTTGTCTGGGGGACAAGGGGTCGCAGGTTCAAA
TCCTGCCGTTCCGACCA
Downstream region at tRNA end position 
catctattat
Secondary structure (Cloverleaf model)
>W1610003096	Pro	GGG
                   t      ACCA catctattat
                     C - G
                     G - C
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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