The detailed information of tRNA gene sequence


Sequence ID>W1610003098
Genome IDAEXL02000101
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosopumilus salaria salaria BD31 [AEXL]
Start position on genome 11782
End posion on genome 11707
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tcgatttagc
tRNA gene sequence 
AGCCCGGTAGTGTAGCGGTCAAGCATAGAGGCCTTTGAAGCCTTTGACCCCAGTTCGAGT
CTGGGCCGGGCTACCT
Downstream region at tRNA end position 
ttttaaaaat
Secondary structure (Cloverleaf model)
>W1610003098	Gln	TTG
                   c      ACCT ttttaaaaat
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     G G G T C     A
      C G A        A      | | | | |     G
    G       T G T G       C C C A G     C
    G       + | | +                 T T
    T       G C A T
      C A A        A     TGAC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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