The detailed information of tRNA gene sequence


Sequence ID>W1610003121
Genome IDAEYO01000005
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome acidophilus ARMAN-5_'5-way FS' [AEYO]
Start position on genome 1546
End posion on genome 1474
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttacttatac
tRNA gene sequence 
GCTCTCGTAGTCTAGCGGCCAAGGACAGTGGCCTCTCGAGTCACTGACCCGGGTTCAAAT
CCCGGCGGGAGCAttc
Downstream region at tRNA end position 
atattaacgt
Secondary structure (Cloverleaf model)
>W1610003121	Glu	CTC
                   c      Attc atattaacgt
                     G - C
                     C - G
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    G       T C T G       C C G G G     C
    G       + | | |                 T T
    C       G G A C
      C A A        A     TGAC
                    G - C
                    T - A
                    G - C
                    G + T
                    C - G
                  C       A
                  T       G
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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