The detailed information of tRNA gene sequence


Sequence ID>W1610003296
Genome IDAFPU01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosarchaeum koreense koreensis MY1 [AFPU]
Start position on genome 1059802
End posion on genome 1059894
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taatttcatT
tRNA gene sequence 
GGACCGGTTGTCTAGTGGTTAGGATGACGCACTCACACTGCGTATGGAGAAATCCCGCAA
AGGTCGAGGGTTCAAATCCCTCCCGGTCCATCt
Downstream region at tRNA end position 
ctctagcctc
Secondary structure (Cloverleaf model)
>W1610003296	Val	CAC
                   T      ATCt ctctagcctc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        T      | | | | |     A
    G       T C T G       G A G G G     C
    G       + | | +                 T T
    T       G G A T
      T A          G     ATGGAGAAATCCCGCAAAGGTC
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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