The detailed information of tRNA gene sequence


Sequence ID>W1610003309
Genome IDAFPU01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosarchaeum koreense koreensis MY1 [AFPU]
Start position on genome 176624
End posion on genome 176551
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tctaaacttc
tRNA gene sequence 
GGGGATGTAGGTTAGCTTGGTATACTGCCAGCCTCGGGTGCTGGAGATCATGGGTTCAAA
TCCCATCGTTCCCAttt
Downstream region at tRNA end position 
ttaagaaagt
Secondary structure (Cloverleaf model)
>W1610003309	Pro	CGG
                   c      Attt ttaagaaagt
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C          T A
                    T     T A C C C     A
      C G A        A      | | | | |     A
    T       T T G G       A T G G G     C
    T         | | +                 T T
    G       T A C T
      G T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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