The detailed information of tRNA gene sequence


Sequence ID>W1610004214
Genome IDAGIW01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [AGIW]
Start position on genome 1299000
End posion on genome 1299086
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catgaggagc
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGTCTAAGGGGCTGGCCTTGAGAGCCAGTGGGCTCACGCCCGCG
CGGGTTCAAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
tcccttattt
Secondary structure (Cloverleaf model)
>W1610004214	Ser	TGA
                   c      GCCA tcccttattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGGGCTCACGCCCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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