The detailed information of tRNA gene sequence


Sequence ID>W1610004216
Genome IDAGIW01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [AGIW]
Start position on genome 1360652
End posion on genome 1360578
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
catcaaaaga
tRNA gene sequence 
GGGCCCGTCGTCTAGCTTGGTTAGGACGCCGCCCTGACACGGCGGAGGCCCGGGGTTCAA
GTCCCCGCGGGCCCAtta
Downstream region at tRNA end position 
cttccttatg
Secondary structure (Cloverleaf model)
>W1610004216	Val	GAC
                   a      Atta cttccttatg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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