The detailed information of tRNA gene sequence


Sequence ID>W1610004218
Genome IDAGIW01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus DSM 16532 [AGIW]
Start position on genome 1189545
End posion on genome 1189468
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cctggataaa
tRNA gene sequence 
GGGCCCGTCGCCTAGCCAGGATAGGGCGCCGGCCTGCGGAGCCGGAGGCCCCGGGTTCAA
GTCCCGGCGGGCCCGCTA
Downstream region at tRNA end position 
cattttcaga
Secondary structure (Cloverleaf model)
>W1610004218	Arg	GCG
                   a      GCTA cattttcaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  A         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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