The detailed information of tRNA gene sequence


Sequence ID>W1610004241
Genome IDAGIY02000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanolinea tarda NOBI-1 [AGIY]
Start position on genome 485171
End posion on genome 485244
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ccaatcctgc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttt
Downstream region at tRNA end position 
ccttttgttt
Secondary structure (Cloverleaf model)
>W1610004241	Val	GAC
                   c      Attt ccttttgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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