The detailed information of tRNA gene sequence


Sequence ID>W1610004512
Genome IDAHJG01000034
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 11814
End posion on genome 11900
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggcaatctgt
tRNA gene sequence 
GCGGGGATCGCCTAGCTTGGTAGGGCGTGGGATTGCTAATCCCATGTCAGCAATGACTCG
TGGGTTCAAATCCCTCTCCCCGCGCCT
Downstream region at tRNA end position 
ttggtttcta
Secondary structure (Cloverleaf model)
>W1610004512	Ser	GCT
                   t      GCCT ttggtttcta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTCAGCAATGACTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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