The detailed information of tRNA gene sequence


Sequence ID>W1610004520
Genome IDAHJG01000177
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 3562
End posion on genome 3638
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gggatttact
tRNA gene sequence 
GGGATCGTGGTCTAGCTTGGTATGATTCTGCGTTTGGGACGCAGAGGTCGTGTGTTCAAA
TCACGCCGATCCCACCA
Downstream region at tRNA end position 
tccattatct
Secondary structure (Cloverleaf model)
>W1610004520	Pro	TGG
                   t      ACCA tccattatct
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C          T A
                    T     C G C A C     A
      C G A        G      | + | | |     A
    T       T C T G       G T G T G     C
    T         | | +                 T T
    G       T G A T
      G T A        T     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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