The detailed information of tRNA gene sequence


Sequence ID>W1610004524
Genome IDAHJG01000191
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 3700
End posion on genome 3615
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatttagatc
tRNA gene sequence 
GCGGGAGTCGCCCAGCCCGGTCAAAGGCGTAAGGTTCAGATCCTTATCTTCTAGGAGTTC
GTGGGTTCAAATCCCACTTCCCGCACat
Downstream region at tRNA end position 
aatcatcaat
Secondary structure (Cloverleaf model)
>W1610004524	Leu	CAG
                   c      ACat aatcatcaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     A
  C         C C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTTCTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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