The detailed information of tRNA gene sequence


Sequence ID>W1610004528
Genome IDAHJG01000246
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 5788
End posion on genome 5862
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
actgattatt
tRNA gene sequence 
GGGCCGATCGTCTAGTCTGGTAGGATGGGTGCATGGCATGCATCAGATCGAGGGTTCAAA
TCCCTTTCGGTCCACtc
Downstream region at tRNA end position 
ttttttacat
Secondary structure (Cloverleaf model)
>W1610004528	Ala	GGC
                   t      ACtc ttttttacat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        C      + | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     AGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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