The detailed information of tRNA gene sequence


Sequence ID>W1610004529
Genome IDAHJG01000246
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 4774
End posion on genome 4699
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tctgatcttT
tRNA gene sequence 
GGGGACGTAGGTTAGCTTGGTATACTGCCAGCCTCGGGTGCTGGAGATCGTGGGTTCAAA
TCCCATCGTCCCCATta
Downstream region at tRNA end position 
tttatgaaat
Secondary structure (Cloverleaf model)
>W1610004529	Pro	CGG
                   T      ATta tttatgaaat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C G A        A      + | | | |     A
    T       T T G G       G T G G G     C
    T         | | +                 T T
    G       T A C T
      G T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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