The detailed information of tRNA gene sequence


Sequence ID>W1610004534
Genome IDAHJG01000286
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Nitrosarchaeum limnium limnia BG20 [AHJG]
Start position on genome 3158
End posion on genome 3085
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcttccatga
tRNA gene sequence 
GGGGTCGTAGTCTAGCTTGGTATGATACTAGTCTGGGGGACTAGTGGTCGCAGGTTCAAT
TCCTGCCGGCCCCAtta
Downstream region at tRNA end position 
caattttaat
Secondary structure (Cloverleaf model)
>W1610004534	Pro	GGG
                   a      Atta caattttaat
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      C G A        A      | | | | |     A
    T       T C T G       G C A G G     C
    T         | | +                 T T
    G       T G A T
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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