The detailed information of tRNA gene sequence


Sequence ID>W1610004830
Genome IDAHKJ01000092
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera yellowstonensis MK1 [AHKJ]
Start position on genome 49691
End posion on genome 49782
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gctctacctt
tRNA gene sequence 
GGGCCCGTAGCTTAGCCAGGTAGAGCGACGGGCTCTTAACCAATACGGGAGGTACCCGTA
GGTCCCGGGTTCGAATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
cactattcct
Secondary structure (Cloverleaf model)
>W1610004830	Lys	CTT
                   t      GCCA cactattcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       T T C G       C C G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     ACGGGAGGTACCCGTAGGTC
                    A - T
                    C   A
                    G   A
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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