The detailed information of tRNA gene sequence


Sequence ID>W1610004838
Genome IDAHKJ01000098
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera yellowstonensis MK1 [AHKJ]
Start position on genome 134328
End posion on genome 134405
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttctcttagt
tRNA gene sequence 
GCCGCAGTAGTCTAGCCCGGTTCAGGATGAGGGCCTGTCGAGCCCTTGACCCGGGTTCAA
ATCCCGGCTGCGGCGCCA
Downstream region at tRNA end position 
ttcttttaca
Secondary structure (Cloverleaf model)
>W1610004838	Asp	GTC
                   t      GCCA ttcttttaca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    T T C A        G     TGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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