The detailed information of tRNA gene sequence


Sequence ID>W1610004844
Genome IDAHKJ01000098
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera yellowstonensis MK1 [AHKJ]
Start position on genome 167
End posion on genome 77
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caataaccaT
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCACCCGGCTGAAGACTAGGCTCAGGTACCGGGTTG
TCCGGGGTTCAAATCCCCGCGGCGGCATCC
Downstream region at tRNA end position 
cctctcttaa
Secondary structure (Cloverleaf model)
>W1610004844	Phe	GAA
                   T      ATCC cctctcttaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        A     CTCAGGTACCGGGTTGTC
                    C - G
                    C - G
                    C   A
                    G + T
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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