The detailed information of tRNA gene sequence


Sequence ID>W1610004850
Genome IDAHKJ01000108
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera yellowstonensis MK1 [AHKJ]
Start position on genome 188624
End posion on genome 188699
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aggtgtcaga
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGACTAAGATGCTAGGCTTGGGCCCTAGTGATCGCGGGTTCA
AATCCCGCCGGCCCCAttc
Downstream region at tRNA end position 
tccttccttt
Secondary structure (Cloverleaf model)
>W1610004850	Pro	TGG
                   a      Attc tccttccttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       G C G G G     C
  G         | | | +                 T T
  G         A G A T
    A C T A        G     TGATC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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