The detailed information of tRNA gene sequence


Sequence ID>W1610004873
Genome IDAHKP01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoplanus limicola DSM 2279 [AHKP]
Start position on genome 562297
End posion on genome 562212
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
gtataatggc
tRNA gene sequence 
GCGAGAGTTTCCGAGTGGCCAAAGGAGCCGGACTCAAGATCCGATCTCGCAGGAGTTCGC
AGGTTCAAATCCTGCCTCTCGCATCA
Downstream region at tRNA end position 
ggttttattt
Secondary structure (Cloverleaf model)
>W1610004873	Leu	CAA
                   c      ATCA ggttttattt
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
      T G A        T      | | | | |     A
    G       G C C T       G C A G G     C
    G         | | |                 T T
    C       A G G A
      C A A        G     TCTCGCAGGAGTTC
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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