The detailed information of tRNA gene sequence


Sequence ID>W1610004877
Genome IDAHKP01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanoplanus limicola DSM 2279 [AHKP]
Start position on genome 307363
End posion on genome 307291
Amino Acid Pseudo
Anticodon CGG
Upstream region at tRNA start position 
aaatttatga
tRNA gene sequence 
GGGGTCGTGGGGTAGCCTGGAATCCTATGGCGTTCGGGATGCTGTAACCTGAGTTCGAAT
CTCAGCGACCCCAttg
Downstream region at tRNA end position 
tcaaatttaa
Secondary structure (Cloverleaf model)
>W1610004877	Pseudo	CGG
                   a      Attg tcaaatttaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      C G A        G      | | | | |     G
    C       T G G G       C T G A G     C
    T         | | +                 T T
    G       T C C T
      G A A        A     TAAC
                    T + G
                    G + T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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