The detailed information of tRNA gene sequence


Sequence ID>W1610004906
Genome IDAHVB01000009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis DSM 5473 [AHVB]
Start position on genome 268
End posion on genome 343
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ttgggtttgt
tRNA gene sequence 
GCCGCCGTAGCTTAGTCGGTAGAGCGCCGGACTGTTAATCCGGTGGTCGCCCGTTCAAGT
CGGGCCGGCGGCGCCA
Downstream region at tRNA end position 
gtcttcgtgg
Secondary structure (Cloverleaf model)
>W1610004906	Asn	GTT
                   t      GCCA gtcttcgtgg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     C G G G C     A
      T G A        A      | | | | |     A
    C       T T C G       G C C C G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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