The detailed information of tRNA gene sequence


Sequence ID>W1610004916
Genome IDAHVB01000032
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus litoralis DSM 5473 [AHVB]
Start position on genome 5391
End posion on genome 5314
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gattgggcgt
tRNA gene sequence 
GGGCCGGTAGCTTAGCATGGTTAGAGCGGCGGACTCTTAATCCGCAGGTCGGGGGTTCAA
ATCCCCCCCGGCCCGCCA
Downstream region at tRNA end position 
aataggctct
Secondary structure (Cloverleaf model)
>W1610004916	Lys	CTT
                   t      GCCA aataggctct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C C C C C     A
    A C G A        A      | | | | |     A
  T         T T C G       G G G G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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