The detailed information of tRNA gene sequence


Sequence ID>W1610005396
Genome IDAJVI01000003
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. SJ [AJVI]
Start position on genome 135230
End posion on genome 135157
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctgtgacaa
tRNA gene sequence 
GGGATCGTCGTCTAGCTTGGTATGATACTAGTCTGGGGGACTAGTGGTCGCAGGTTCAAA
TCCTGCCGGTCCCAtta
Downstream region at tRNA end position 
caatttcaaa
Secondary structure (Cloverleaf model)
>W1610005396	Pro	GGG
                   a      Atta caatttcaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        C      | | | | |     A
    T       T C T G       G C A G G     C
    T         | | +                 T T
    G       T G A T
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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