The detailed information of tRNA gene sequence


Sequence ID>W1610005401
Genome IDAJVI01000005
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. SJ [AJVI]
Start position on genome 40532
End posion on genome 40618
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatttatagT
tRNA gene sequence 
GCGGGAGTCGCCCAGCCTGGTCAACGGCGTAAGGTTCAGATCCTTATCTTCTAGGAGTTC
GTGGGTTCAAATCCCACTTCCCGCATaa
Downstream region at tRNA end position 
ttcagttatt
Secondary structure (Cloverleaf model)
>W1610005401	Leu	CAG
                   T      ATaa ttcagttatt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T          T A
                    T     C A C C C     A
    C C G A        C      | | | | |     A
  T         C C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTTCTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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