The detailed information of tRNA gene sequence


Sequence ID>W1610005407
Genome IDAJVI01000006
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. SJ [AJVI]
Start position on genome 23293
End posion on genome 23366
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catctgctta
tRNA gene sequence 
GGGCCCGTAACTCAGCTTGGTAGAGTAACCGGCTCATAACCGGTGAGCCAAGGGATCGAA
GCCCTTCGGGCCCAtat
Downstream region at tRNA end position 
attttcaatt
Secondary structure (Cloverleaf model)
>W1610005407	Met	CAT
                   a      Atat attttcaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          G A
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C A       A A G G G     C
    T       | | | |                 A T
    G       G A G T
      G T A        A     GAGCC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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