The detailed information of tRNA gene sequence


Sequence ID>W1610005464
Genome IDAJVJ01000048
Search identical group
Phylum/ClassNitrososphaerota
SpeciesNitrosopumilus sp. AR [AJVJ]
Start position on genome 9745
End posion on genome 9669
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgattcttgt
tRNA gene sequence 
GGGTCTGTAGTCTAGCCTGGTAGGACGATGGTCTCCAAAACCATCGGTCGTCGGTTCAAA
TCCGTCTGGGCCCACCA
Downstream region at tRNA end position 
ttattttatt
Secondary structure (Cloverleaf model)
>W1610005464	Trp	CCA
                   t      ACCA ttattttatt
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          T A
                    T     C T G C C     A
      C G A        A      |   | | |     A
    C       T C T G       G T C G G     C
    T       + | | |                 T T
    G       G G A C
      G T A        G     CGGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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