The detailed information of tRNA gene sequence


Sequence ID>W1610005913
Genome IDALJD01000014
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalogranum salarium B-1 [ALJD]
Start position on genome 41173
End posion on genome 41245
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
gcagtcccga
tRNA gene sequence 
GAGTCGATAGTCCAGCGGACGACGATCTGTGCCTTGAGTGCACAGAACCGAGGTTCGAAT
CCTCATCGGCTCGatg
Downstream region at tRNA end position 
tgccgtgtct
Secondary structure (Cloverleaf model)
>W1610005913	Pseudo	TGA
                   a      Gatg tgccgtgtct
                     G - C
                     A - T
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T          T A
                    T     A C T C C     A
      C G A        A        | | | |     G
    G       C C T G       C G A G G     C
    G         | | +                 T T
    A       C G A T
      C G A        C     GAAC
                    T - A
                    G - C
                    T - A
                    G - C
                    C - G
                  C       T
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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