The detailed information of tRNA gene sequence


Sequence ID>W1610005969
Genome IDALXK01000002
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon SCGC AB-539-E09 [ALXK]
Start position on genome 1883
End posion on genome 1961
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttaggtacgt
tRNA gene sequence 
GGGGCCGTGGTCTAGCTTGGTCCAAGATTCGCGCTTGGGGTGTGCGAGGTCGTGAGTTCA
AATCTCACCGGCCCCACCA
Downstream region at tRNA end position 
ttgcattcac
Secondary structure (Cloverleaf model)
>W1610005969	Pro	GGG
                   t      ACCA ttgcattcac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C T C     A
    T C G A        G      | | | | |     A
  T         T C T G       G T G A G     C
  G         | | | +                 T T
  G         A G A T
    T C C A        T     AGGTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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