The detailed information of tRNA gene sequence


Sequence ID>W1610005970
Genome IDALXK01000019
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon SCGC AB-539-E09 [ALXK]
Start position on genome 5730
End posion on genome 5644
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttgcccgt
tRNA gene sequence 
GCCGGGGTTTCCTAGCCTGGTAAGGAGCAGGCCTGCTAAGTCTGTGACCCTTGGGTCGCG
AGGGTTCGAATCCCTCTCCCGGCGCCA
Downstream region at tRNA end position 
tcgtcatgcg
Secondary structure (Cloverleaf model)
>W1610005970	Ser	GCT
                   t      GCCA tcgtcatgcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        T      | | | | |     G
    C       T C C T       G A G G G     C
    T       | | | |                 T T
    G       A G G A
      G T A        G     TGACCCTTGGGTCGC
                    C - G
                    A - T
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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