The detailed information of tRNA gene sequence


Sequence ID>W1610005971
Genome IDALXK01000023
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon SCGC AB-539-E09 [ALXK]
Start position on genome 68
End posion on genome 144
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgcgttgtc
tRNA gene sequence 
GGGGTCGTGGTCAAGCTTGGTACGATACGCGGTTTGGGTCCGCGTGATCCCCGGTTCGAA
TCCGGGCGACCCCACCA
Downstream region at tRNA end position 
ttttccgtat
Secondary structure (Cloverleaf model)
>W1610005971	Pro	TGG
                   c      ACCA ttttccgtat
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    T       A C T G       C C C G G     C
    T         | | +                 T T
    G       C G A T
      G T A        A     TGATC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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