The detailed information of tRNA gene sequence


Sequence ID>W1610005974
Genome IDALXK01000078
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon SCGC AB-539-E09 [ALXK]
Start position on genome 1926
End posion on genome 2012
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttcctaggg
tRNA gene sequence 
GCCGGGGTAGCCAAGCGGACTACGGCGCCAGTCTTGAAAACTGGTTCTCTTCGGAGAGCA
TGGGTTCGAATCCCATTCCCGGCGCCA
Downstream region at tRNA end position 
tatttgccga
Secondary structure (Cloverleaf model)
>W1610005974	Ser	TGA
                   g      GCCA tatttgccga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    G       A C C G       A T G G G     C
    G         | | |                 T T
    A       C G G C
      C T A        G     TTCTCTTCGGAGAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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