The detailed information of tRNA gene sequence


Sequence ID>W1610005985
Genome IDALXL01000047
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-539-N05 [ALXL]
Start position on genome 4328
End posion on genome 4241
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctaaatgcat
tRNA gene sequence 
GCAGGGGTAGCCAAGCCAGGTCAACGGCGACAGACTCAAGATCTGTTCCTGTAGAGGTTC
GGGAGTTCAAATCTCCTCCCCTGCACCT
Downstream region at tRNA end position 
ttttcacctt
Secondary structure (Cloverleaf model)
>W1610005985	Leu	CAA
                   t      ACCT ttttcacctt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C C T C     A
    C C G A        A      + | | | |     A
  A         A C C G       G G G A G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCCTGTAGAGGTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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