The detailed information of tRNA gene sequence


Sequence ID>W1610005990
Genome IDALXL01000094
Search identical group
Phylum/ClassUnclassified
SpeciesThermoplasmatales archaeon SCGC AB-539-N05 [ALXL]
Start position on genome 6329
End posion on genome 6253
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
catacattct
tRNA gene sequence 
GGATCTGTAGTGTAGCTTGGATATCACAGAGGCTTCCGGAGCCTCTGACTCGGGTTCGAA
TCCCGGCAGATCCGCTA
Downstream region at tRNA end position 
cagttttctc
Secondary structure (Cloverleaf model)
>W1610005990	Arg	CCG
                   t      GCTA cagttttctc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      + | | | |     G
  T         T G T G       T C G G G     C
  G           | | |                 T T
  G         T C A C
    A T A          A     TGAC
                    G - C
                    A - T
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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